Looking back at the past bioinformatics projects that my group handled during the last 3 years, I created a couple of informative images.
If we look more closely at the types of projects, we have this distribution:
MeDIP (Methylated DNA immuniprecipitation) is an enrichment technique that uses antibodies specific to 5mC (methylated cytocines) to isolate methylated DNA fragments.
In brief, the DNA is denaturated to separate the double-strnaded DNA into single stranded DNA. This process enables the methyl-group to be accessible. Then, monoclonal or polyclonal antibodies …
A singularity container environment manager
read moreHow to interpret the fastqc, multiqc and output of sequana_fastqc and sequana_demultiplex pipelines
read moreHere is an update of the open projects (green) and closed projects during the last 6 months (sept 2019 to feb 2020). This was a hard time. We were still in the process of catching up with projects (march-sept 2019) when 2 engineers left the platform and only one replaced …
read moreManaging multiple projects is a hard task. Within the Biomics Platform, we manage about 200 projects a year. Within the group, we deal with various daily tasks and issues: analysing genomic data, helping users in solving their sequencing problems, working with the wetlab, managing our submission website, etc. Overall …
read morea mixture model implementation in Python
read moreABySS 2.0: resource-efficient assembly of large genomes using a Bloom filter
read moreHow to send or receive large file
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