Topics: Transcriptomics (Illumina)
Origin: IP
Project type: Expertise
Name of Applicant: Baptiste Arnaud
Date of application: 27-11-2024
Unit: Dynamics of Immune Responses
Location: Metchnikoff, 4th floor, 4017
Phone: 0781275399
@ Mail: baptiste.arnaud@pasteur.fr
@ PI-Mail: philippe.bousso@pasteur.fr
Project context and summary: Chimeric antigen receptor (CAR) T cells have shown promising success to treat B cell malignancies but many solid tumors do not respond to these treatments.
To address this issue, we will develop a mice model of solid tumor for anti-CD19 CAR T cell therapy that we could compare with well establish models of B cell malignancies, pro-B acute leukemia and Burkitt lymphoma. The solid tumor model will be based on several tumor cell lines both expressing FRET-based reporter for apoptosis, the DEVD probe, and CD19 (MC38-CD19-DEVD and B16-CD19-DEVD). We will inject ectopically these tumors in conditioned mice then we will treat them with anti-CD19 CAR T. We will perform intravital biphotonic imaging directly in the solid tumor or in the bone marrow to compare the CAR T cells dynamics (speed, trajectories) and killing capacities: contacts between CAR T cells and tumor (time and number of contacts per CAR T cells), apoptotic events after direct contacts. We will also analyze tumor CAR T cell infiltration using flow cytometry. Finally, we will perform bulk RNA seq to investigate how CAR T cells modulates tumor cells’ phenotype. As a conclusion, this project’s aim is to improve current knowledge about CAR T cells in solid tumors.
Related team publications:Thibaut R, Bost P, Milo I, Cazaux M, Lemaître F, Garcia Z, Amit I, Breart B, Cornuot C, Schwikowski B, Bousso P. Bystander IFN-γ activity promotes widespread and sustained cytokine signaling altering the tumor microenvironment. Nat Cancer. 2020 Mar;1(3):302-314. doi: 10.1038/s43018-020-0038-2. Epub 2020 Mar 9. PMID: 32803171; PMCID: PMC7115926.
Boulch M, Cazaux M, Loe-Mie Y, Thibaut R, Corre B, Lemaître F, Grandjean CL, Garcia Z, Bousso P. A cross-talk between CAR T cell subsets and the tumor microenvironment is essential for sustained cytotoxic activity. Sci Immunol. 2021 Mar 26;6(57):eabd4344. doi: 10.1126/sciimmunol.abd4344. PMID: 33771887.
Boulch M, Cazaux M, Cuffel A, Guerin MV, Garcia Z, Alonso R, Lemaître F, Beer A, Corre B, Menger L, Grandjean CL, Morin F, Thieblemont C, Caillat-Zucman S, Bousso P. Tumor-intrinsic sensitivity to the pro-apoptotic effects of IFN-γ is a major determinant of CD4+ CAR T-cell antitumor activity. Nat Cancer. 2023 Jul;4(7):968-983. doi: 10.1038/s43018-023-00570-7. Epub 2023 May 29. PMID: 37248395; PMCID: PMC10368531.
Manager: iakov.vitrenko@pasteur.frStatus: Kick-off meeting