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#6202 : Transcriptomic characterization of patients displaying Cockayne and Cockayne-like syndromes
Topics: Transcriptomics (Illumina)
Origin: Academic
Project type: Collaboration

Name of Applicant: Le May Nicolas
Date of application: 27-10-2021
Unit: Other
Location: CRBS, 1 rue Eugène Boeckel 67084 STRASBOURG CEDEX
Phone: 0368853089
@ Mail: nicolas.le-may@inserm.fr

Project context and summary:

Gene expression is associated with DNA repair via specific pathways to ensure the continuity of RNA synthesis and the genome integrity after DNA damage. Several proteins are essential to control both transcription and some DNA repair pathways. Mutations on these specific proteins can originate genetic disorders such as Cockayne syndrome (CS) due to mutations on CSA and CSA mainly. Recently, mutations localized on unrelated proteins have been associated to rare diseases phenocopying CS regrouped as CS-like. Our project aims to characterize the transcriptomic profile of fibroblasts derived from different CS and CS-like patients with or without induction of DNA damage through UV-irradiation. We expect to identify signatures that will allow to uncover similarities and/or specificities between CS and CS-like context. Such transcriptomic signatures are crucial to better understand these rare diseases and develop tools for a more relevant diagnosis.


Related team publications:
Calmels N, Botta E, Jia N, et al. Functional and clinical relevance of novel mutations in a large cohort of patients with Cockayne syndrome. J Med Genet. 2018 May;55(5):329-343.
Epanchintsev A, Costanzo F, Rauschendorf MA, et al. Cockayne’s Syndrome A and B Proteins Regulate Transcription Arrest after Genotoxic Stress by Promoting ATF3 Degradation. Mol Cell. 2017 Dec 21;68(6):1054-1066.e6.
Service Delivery
Manager: marc.monot@pasteur.fr
Status: Closed


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