Institut Pasteur
Biomics
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Characterising the methylation activity of a bacterial genetic element encoding diversity-generating components

Status: Kick-off meeting

Project ID: B21332

Owner: Nadav Ben-Assa

Unit: Synthetic Biology

Experiment type: To be determined

Location: Jacob Building (26) - Floor 2 - Room 1

Description

Bacteria use diverse strategies to defend themselves against bacteriophages, including DNA methylation-based systems that chemically mark and protect their own genome. Diversity-Generating Retroelements (DGRs) are bacterial genetic cassettes that can rapidly mutate specific target genes. We have identified a DGR system potentially associated with methylation-related genes, raising the possibility that DGR activity may influence bacterial DNA methylation. To test this, I have cloned the system into Escherichia coli and will use SMRT sequencing to compare its methylation profile to a control strain, identifying which DNA sites are methylated and how.

Submitted: 2026-04-24 09:32 · Last updated: 2026-04-24 09:32